BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016F08SP1|AL427046
(834 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig600 1408 0.0
3x_Contig322 207 3e-53
>3x_Contig600
Length = 2338
Score = 1408 bits (708), Expect = 0.0
Identities = 715/716 (99%), Gaps = 1/716 (0%)
Strand = Plus / Minus
Query: 1 ctacagcaaatgccactaaagttgttgaaaccttaggtcatgatcatccattcaagaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ctacagcaaatgccactaaagttgttgaaaccttaggtcatgatcatccattcaagaatg 680
Query: 61 taacgataaagattggatacgccaagaaatgattctacatttcaatgcgaatcaataaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 taacgataaagattggatacgccaagaaatgattctacatttcaatgcgaatcaataaat 620
Query: 121 tcaaagcgttcacaggtcggaactggaaccaacaatctacgctttaatagtacatttatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tcaaagcgttcacaggtcggaactggaaccaacaatctacgctttaatagtacatttatc 560
Query: 181 agcaacagataaacagaataaatagaatagattgaatataaattatttacagtcagtgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agcaacagataaacagaataaatagaatagattgaatataaattatttacagtcagtgta 500
Query: 241 tggaggcctgtacagtacagatacactagaaacgaaaaagacagaaatgatatatacata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tggaggcctgtacagtacagatacactagaaacgaaaaagacagaaatgatatatacata 440
Query: 301 tatgcatacgaagctctaaaaccctgaaaccgaaattacttaccaaatacgacagttctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tatgcatacgaagctctaaaaccctgaaaccgaaattacttaccaaatacgacagttctc 380
Query: 361 atagctgtaaagaaagtttccttacccttaccttcgatttcgtcatgcaatcttttgtaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atagctgtaaagaaagtttccttacccttaccttcgatttcgtcatgcaatcttttgtaa 320
Query: 421 taaattgggttacctgctggcttgtataatttgtcccctacagcataataattcttatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 taaattgggttacctgctggcttgtataatttgtcccctacagcataataattcttatat 260
Query: 481 ttatcgctcattatagcattcaacgatcttatctgttcttggatttgagtatcgttgaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttatcgctcattatagcattcaacgatcttatctgttcttggatttgagtatcgttgaaa 200
Query: 541 tgttcttctggtaaagcctcttgaactttctttaatagatctttcttcaaacctaatggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tgttcttctggtaaagcctcttgaactttctttaatagatctttcttcaaacctaatggg 140
Query: 601 ccagaagttctgttgataatatccttaatctctgcaagagaaaggcttactttgctcaga 660
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 139 ccagaagttctgttgataatatccttaatctctgcaagag-aaggcttactttgctcaga 81
Query: 661 ggcactaccggtttctattccggcaactggacggaacctatctagttgtgactctt 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 ggcactaccggtttctattccggcaactggacggaacctatctagttgtgactctt 25
>3x_Contig322
Length = 1586
Score = 207 bits (104), Expect = 3e-53
Identities = 107/110 (97%)
Strand = Plus / Plus
Query: 725 atragatgcttaacacgctccttagggracttctctaacagcttcactaattgcttagca 784
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2 atgagatgcttaacacgctccttagggaacttctctaacagcttcactaattgcttagca 61
Query: 785 ctttcttttgttgcttgcgacatctttgttttgtatctgtgcyaatatgg 834
|||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 62 ctttcttttgttgcttgcgacatctttgttttgtatctgtgctaatatgg 111
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7092
Number of Sequences: 1807
Number of extensions: 7092
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 2
length of query: 834
length of database: 10,358,551
effective HSP length: 16
effective length of query: 818
effective length of database: 10,329,639
effective search space: 8449644702
effective search space used: 8449644702
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)